Download all pubmed abstracts

pubmedweb-scraping

Does anyone know how I can easily download all of the pubmed article abstracts? I am working on a text mining project.

The closest one I can find can download one abstract at a time given an pmid, but that would be too slow for my purpose since I'd have to download them one at a time.

Best Solution

You can get ALL the data from NLM directly via FTP.

https://www.nlm.nih.gov/databases/download/terms_and_conditions_pubmed.html

Download and work away without worrying about e-utils.

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