How to copy a folder from remote to local using scp

Use the subprocess module in the standard library:

import subprocess
subprocess.run(["ls", "-l"])

The advantage of subprocess.run over os.system is that it is more flexible (you can get the stdout, stderr, the "real" status code, better error handling, etc...).

Even the documentation for os.system recommends using subprocess instead:

The subprocess module provides more powerful facilities for spawning new processes and retrieving their results; using that module is preferable to using this function. See the Replacing Older Functions with the subprocess Module section in the subprocess documentation for some helpful recipes.

On Python 3.4 and earlier, use subprocess.call instead of .run:

subprocess.call(["ls", "-l"])

If Machine A is a Windows box, you can use Plink (part of PuTTY) with the -m parameter, and it will execute the local script on the remote server.

plink root@MachineB -m local_script.sh

If Machine A is a Unix-based system, you can use:

ssh root@MachineB 'bash -s' < local_script.sh

You shouldn't have to copy the script to the remote server to run it.